Tag
Seed Extension
The algorithms used to extend a seed.
Include Headers
seqan/seeds.h
Functions

extendSeed | Extends a seed.
extendSeed | Extends a seed.
extendSeed | Extends a seed.
extendSeeds | Extension of seeds.
extendSeeds | Extension of seeds.
extendSeeds | Extension of seeds.
extendSeedScore | Extends a seed and increases the score.
extendSeedScore | Extends a seed and increases the score.
extendSeedScore | Extends a seed and increases the score.
extendSeedsScore | Extension of seeds with score calculation.
extendSeedsScore | Extension of seeds with score calculation.
extendSeedsScore | Extension of seeds with score calculation.

Tags

MatchExtend | Extends a seed until a mismatch occurs.
UngappedXDrop | Ungapped extension of a seed until score drops below a Value.
GappedXDrop | Gapped extension of a seed until score drops below a Value. Only SimpleSeeds.

See Also
extendSeedScore, extendSeedsScore, extendSeed, extendSeeds
SeqAn - Sequence Analysis Library - www.seqan.de

Page built @2012/03/14 16:34:52