Bio::Blast::Default::Report::HSP holds information about the hsp (high-scoring segment pair).
statistical method for calculating evalue and/or score (nil or a string) (note that composition-based statistics for blastp or tblastn were enabled by default after NCBI BLAST 2.2.17)
Creates new HSP object. It is designed to be called only internally from the Bio::Blast::Default::Report::Hit class. Users should not call the method directly.
# File lib/bio/appl/blast/format0.rb, line 949 def initialize(data) @f0score = data.shift @f0alignment = [] while r = data[0] and /^(Query|Sbjct)\:/ =~ r @f0alignment << data.shift end end
Generated with the Darkfish Rdoc Generator 2.