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Packages that use org.biojava.bio.program.homologene | |
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org.biojava.bio.program.homologene | Support classes for Homologene data. |
Classes in org.biojava.bio.program.homologene used by org.biojava.bio.program.homologene | |
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AbstractOrthologueSet
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AbstractOrthoPairCollection
An abstract implementation of the OrthoPairCollection interface. |
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AbstractOrthoPairSet
represents the Homologene Group. |
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DuplicateTaxonException
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HomologeneBuilder
an interface for Homologene dataset Builders |
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HomologeneDB
Homologene is a NCBI dataset that curates sets of orthologues from the reference model organisms. |
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Orthologue
this entry contains data about the orthologue. |
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OrthologueFilter
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OrthologueSet
Interface for classes that store and manipulate orthologues. |
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OrthologueSet.Iterator
An iterator for the contents of an OrthologueSet. |
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OrthoPair
Each HomologeneEntry represents a single Homologene record that relates two presumptive orthologues. |
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OrthoPairCollection
Interface for a Set of OrthoPairSets |
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OrthoPairCollection.Iterator
Iterator for a OrthoPairCollection |
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OrthoPairFilter
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OrthoPairSet
represents the Homologene Group. |
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OrthoPairSet.Iterator
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OrthoPairSetFilter
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SimilarityType
Each HomologeneEntry represents a single Homologene record that relates two presumptive orthologues. |
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SimpleOrthoPairCollection
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Taxon
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