Uses of Class
org.biojava.bio.dp.SimpleMarkovModel

Packages that use SimpleMarkovModel
org.biojava.bio.dp HMM and Dynamic Programming Algorithms. 
org.biojava.bio.program.hmmer Tools for working with profile Hidden Markov Models from the HMMer package. 
 

Uses of SimpleMarkovModel in org.biojava.bio.dp
 

Subclasses of SimpleMarkovModel in org.biojava.bio.dp
 class ProfileHMM
           
 

Uses of SimpleMarkovModel in org.biojava.bio.program.hmmer
 

Subclasses of SimpleMarkovModel in org.biojava.bio.program.hmmer
 class FullHmmerProfileHMM
          This is a class for representing the full HMMER generated Profile HMM (including loop states N and C terminal looping states).
 class HmmerProfileHMM
          This is a class for representing HMMER generated Profile HMM.