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## Package org.biojavax.bio.phylo.io.nexus

Classes to support the I/O of Nexus files.

See:
Description

Interface Summary
CharactersBlockListener | Listens to events that represent Nexus characters blocks.
DataBlockListener | Listens to events that represent Nexus data blocks.
DistancesBlockListener | Listens to events that represent Nexus distances blocks.
NexusBlock | Represents a Nexus block.
NexusBlockBuilder | Builds a Nexus block from listening to events.
NexusBlockListener | Listens to events from NexusBlockParser objects to create objects.
NexusBlockParser | Parses Nexus blocks.
NexusFileListener | Listens to events fired by the Nexus parser.
NexusObject | Represents general info about nexus objects.
TaxaBlockListener | Listens to events that represent Nexus taxa blocks.
TreesBlockListener | Listens to events that represent Nexus trees blocks.

Class Summary
CharactersBlock | Represents Nexus characters blocks.
CharactersBlockBuilder | Builds Nexus characters blocks.
CharactersBlockParser | Parses Nexus characters blocks.
DataBlock | Represents Nexus data blocks.
DataBlockBuilder | Builds Nexus characters blocks.
DataBlockParser | Parses Nexus data blocks.
DistancesBlock | Represents Nexus distances blocks.
DistancesBlockBuilder | Builds Nexus distances blocks.
DistancesBlockParser | Parses Nexus distances blocks.
NexusBlock.Abstract |
NexusBlockBuilder.Abstract | This abstract version knows how to build and add comments.
NexusBlockParser.Abstract | All block parsers should derive from this abstract parser.
NexusComment | Represents a Nexus comment, possibly nested.
NexusFile | Represents Nexus files.
NexusFileBuilder | Builds a Nexus file by listening to events.
NexusFileFormat | Reads/writes Nexus files and fires events at a NexusFileListener object.
NexusFileListener.Abstract | Example abstract implementation which all others should extend.
TaxaBlock | Represents Nexus taxa blocks.
TaxaBlockBuilder | Builds Nexus taxa blocks.
TaxaBlockParser | Parses Nexus taxa blocks.
TreesBlock | Represents Nexus trees blocks.
TreesBlock.NewickTreeString | A simple representation of a Newick tree as a single string.
TreesBlockBuilder | Builds Nexus taxa blocks.
TreesBlockParser | Parses Nexus taxa blocks.

## Package org.biojavax.bio.phylo.io.nexus Description

Classes to support the I/O of Nexus files.

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