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## Uses of Interface
org.biojava.bio.seq.io.agave.StAXHandlerFactory

Packages that use StAXHandlerFactory
org.biojava.bio.seq.io.agave | Classes for converting between AGAVE XML and BioJava objects.

Uses of StAXHandlerFactory in org.biojava.bio.seq.io.agave

Fields in org.biojava.bio.seq.io.agave declared as StAXHandlerFactory
`static StAXHandlerFactory` | `AGAVEAltIdsPropHandler.AGAVE_ALT_IDS_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEAnnotationsHandler.AGAVE_ANNOTATIONS_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEAssemblyHandler.AGAVE_ASSEMBLY_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEBioSeqHandler.AGAVE_BIO_SEQ_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEBioSequenceHandler.AGAVE_BIO_SEQUENCE_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVECdsHandler.AGAVE_CDS_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEChromosomeHandler.AGAVE_CHROMOSOME_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEClassificationHandler.AGAVE_CLASSIFICATION_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVECompResultHandler.AGAVE_COMP_RESULT_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEComputationHandler.AGAVE_COMPUTATION_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEContigHandler.AGAVE_CONTIG_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEDbIdPropHandler.AGAVE_DBID_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEDescPropHandler.AGAVE_DESC_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEElementIdPropHandler.AGAVE_ELEMENT_ID_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEEvidenceHandler.AGAVE_EVIDENCE_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEExonsPropHandler.AGAVE_EXONS_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEFragmentOrderHandler.AGAVE_FRAGMENT_ORDER_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEFragmentOrientationHandler.AGAVE_FRAGMENT_ORIENTATION_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEGeneHandler.AGAVE_GENE_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEIdAliasPropHandler.AGAVE_ID_ALIAS_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEKeywordPropHandler.AGAVE_KEYWORD_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEMapLocationPropHandler.AGAVE_MAP_LOCATION_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEMapPositionPropHandler.AGAVE_MAP_POSITION_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEMatchAlignPropHandler.AGAVE_MATCH_ALIGN_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEMatchDescPropHandler.AGAVE_MATCH_DESC_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEMatchRegionPropHandler.AGAVE_MATCH_REGION_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEMrnaHandler.AGAVE_MRNA_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVENotePropHandler.AGAVE_NOTE_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEPredictedProteinHandler.AGAVE_PREDICTED_PROTEIN_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEQualifierPropHandler.AGAVE_QUALIFIER_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEQueryRegionPropHandler.AGAVE_QUERY_REGION_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVERelatedAnnotPropHandler.AGAVE_RELATED_ANNOT_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEResultGroupHandler.AGAVE_RESULT_GROUP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEResultPropertyPropHandler.AGAVE_RESULT_PROPERTY_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVESciPropertyPropHandler.AGAVE_SCI_PROPERTY_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVESeqFeatureHandler.AGAVE_SEQ_FEATURE_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVESeqLocationPropHandler.AGAVE_SEQ_LOCATION_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVESeqMapHandler.AGAVE_SEQ_MAP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVESeqPropHandler.AGAVE_SEQ_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVETranscriptHandler.AGAVE_TRANSCRIPT_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEUnorderedFragmentsHandler.AGAVE_UNORDERED_FRAGMENTS_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEViewPropHandler.AGAVE_VIEW_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEXrefPropHandler.AGAVE_XREF_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEXrefPropPropHandler.AGAVE_XREF_PROP_PROP_HANDLER_FACTORY`
`static StAXHandlerFactory` | `AGAVEXrefsPropHandler.AGAVE_XREFS_PROP_HANDLER_FACTORY`

Methods in org.biojava.bio.seq.io.agave with parameters of type StAXHandlerFactory
`protected void` | `StAXPropertyHandler.addHandler(ElementRecognizer rec, StAXHandlerFactory handler)`
`protected void` | `StAXFeatureHandler.addHandler(ElementRecognizer rec, StAXHandlerFactory handler)`

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