Overview | Package | Class | Use | Tree | Deprecated | Index | Help
PREV NEXT | FRAMES NO FRAMES

## Uses of Interface
org.biojava.bio.seq.StrandedFeature

Packages that use StrandedFeature
org.biojava.bio.molbio | The classes and interfaces in this package cover common molecular biological techniques such as restriction digests and PCR.
org.biojava.bio.seq | Classes and interfaces for defining biological sequences and informatics objects.
org.biojava.bio.seq.homol | The classes and interfaces for defining sequence similarity and honology.
org.biojava.bio.seq.impl | Standard in-memory implementations of `Sequence` and `Feature`.
org.biojavax.bio.seq | Rich implementations of Sequences, Locations and Features.

Uses of StrandedFeature in org.biojava.bio.molbio

Subinterfaces of StrandedFeature in org.biojava.bio.molbio
`interface` | `RestrictionSite` `RestrictionSite` represents the recognition site of a restriction enzyme.

Uses of StrandedFeature in org.biojava.bio.seq

Subinterfaces of StrandedFeature in org.biojava.bio.seq
`interface` | `ComponentFeature` Feature which represents a component in an assembly (contig).
`interface` | `FramedFeature` Title: FramedFeature.
`interface` | `RemoteFeature` A feature that indicates that there is some remote feature that can't be represented entirely on a single Sequence.

Uses of StrandedFeature in org.biojava.bio.seq.homol

Subinterfaces of StrandedFeature in org.biojava.bio.seq.homol
`interface` | `HomologyFeature`
`interface` | `SimilarityPairFeature` `SimilarityPairFeature` describes a pairwise similarity between two nucleotide sequences (as it extends `StrandedFeature`).

Uses of StrandedFeature in org.biojava.bio.seq.impl

Classes in org.biojava.bio.seq.impl that implement StrandedFeature
`class` | `SimpleFramedFeature` Title: SimpleFramedFeature.
`class` | `SimpleHomologyFeature`
`class` | `SimpleRemoteFeature` A no-frills implementation of a remote feature.
`class` | `SimpleRestrictionSite` `SimpleRestrictionSite` represents the recognition site of a restriction enzyme.
`class` | `SimpleSimilarityPairFeature` `SimpleSimilarityPairFeature` represents a similarity between a query sequence and a subject sequence as produced by a search program.
`class` | `SimpleStrandedFeature` A no-frills implementation of StrandedFeature.

Uses of StrandedFeature in org.biojavax.bio.seq

Subinterfaces of StrandedFeature in org.biojavax.bio.seq
`interface` | `RichFeature` Represents a feature that can be given name and rank and be moved from one sequence to another.

Classes in org.biojavax.bio.seq that implement StrandedFeature
`class` | `SimpleRichFeature` A simple implementation of RichFeature.

Overview | Package | Class | Use | Tree | Deprecated | Index | Help
PREV NEXT | FRAMES NO FRAMES