Overview | Package | Class | Use | Tree | Deprecated | Index | Help
PREV NEXT | FRAMES NO FRAMES

## Uses of Class
org.biojava.utils.ChangeSupport

Packages that use ChangeSupport
org.biojava.bio | The core classes that will be used throughout the bio packages.
org.biojava.bio.dist | Probability distributions over Alphabets.
org.biojava.bio.dp | HMM and Dynamic Programming Algorithms.
org.biojava.bio.gui.sequence | Graphical displays of biological sequences and associated annotations.
org.biojava.bio.program.das | Development client for the Distributed Annotation System.
org.biojava.bio.search | Interfaces and classes for representing sequence similarity search results.
org.biojava.bio.seq | Classes and interfaces for defining biological sequences and informatics objects.
org.biojava.bio.seq.db | Collections of biological sequence data.
org.biojava.bio.seq.distributed | Sequences and SequenceDBs which are composed from data taken from a number of data sources.
org.biojava.bio.seq.impl | Standard in-memory implementations of `Sequence` and `Feature`.
org.biojava.bio.symbol | Representation of the Symbols that make up a sequence, and locations within them.
org.biojava.bio.taxa | Taxonomy object for representing species information.
org.biojava.ontology | A general-purpose API for ontologies.
org.biojava.utils | Miscellaneous utility classes used by other BioJava components.

Uses of ChangeSupport in org.biojava.bio

Methods in org.biojava.bio that return ChangeSupport
`protected ChangeSupport` | `OverlayAnnotation.getChangeSupport(ChangeType changeType)`
`protected ChangeSupport` | `MergeAnnotation.getChangeSupport(ChangeType changeType)`

Constructors in org.biojava.bio with parameters of type ChangeSupport
`Annotatable.AnnotationForwarder(Object source, ChangeSupport cs)` Deprecated. Create a new AnnotationForwarder that will forward events for a source using a change support.
`MergeAnnotation.PropertyForwarder(Object source, ChangeSupport cs)` Create a new forwarder on behalf of a source using the change support.
`OverlayAnnotation.PropertyForwarder(Object source, ChangeSupport cs)` Forward on behalf of source using the change support provided.

Uses of ChangeSupport in org.biojava.bio.dist

Methods in org.biojava.bio.dist that return ChangeSupport
`protected ChangeSupport` | `TranslatedDistribution.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `AbstractOrderNDistribution.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `AbstractDistribution.getChangeSupport(ChangeType ct)`

Constructors in org.biojava.bio.dist with parameters of type ChangeSupport
`Distribution.NullModelForwarder(Object source, ChangeSupport cs)` Deprecated. Create a new forwarder.

Uses of ChangeSupport in org.biojava.bio.dp

Methods in org.biojava.bio.dp that return ChangeSupport
`protected ChangeSupport` | `SimpleMarkovModel.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `SimpleEmissionState.getChangeSupport(ChangeType ct)`

Uses of ChangeSupport in org.biojava.bio.gui.sequence

Methods in org.biojava.bio.gui.sequence that return ChangeSupport
`protected ChangeSupport` | `LabelledSequenceRenderer.generateChangeSupport()`
`protected ChangeSupport` | `TranslatedSequencePanel.getChangeSupport(ChangeType ct)` `getChangeSupport` lazily instantiates a helper for change listeners.
`protected ChangeSupport` | `SequenceRendererWrapper.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `SequencePoster.getChangeSupport(ChangeType ct)` Deprecated.
`protected ChangeSupport` | `SequencePanel.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `PairwiseSequencePanel.getChangeSupport(ChangeType ct)` `getChangeSupport` lazily instantiates a helper for change listeners.
`protected ChangeSupport` | `PairwiseOverlayRenderer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `PairwiseFilteringRenderer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `PaddingRenderer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `OverlayRendererWrapper.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `MultiLineRenderer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `FilteringRenderer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `FeatureBlockSequenceRenderer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `BumpedRenderer.getChangeSupport(ChangeType ct)`

Constructors in org.biojava.bio.gui.sequence with parameters of type ChangeSupport
`PairwiseSequenceRenderer.PairwiseRendererForwarder(PairwiseSequenceRenderer source, ChangeSupport cs)` Creates a new `PairwiseRendererForwarder`.
`SequenceRenderer.RendererForwarder(SequenceRenderer source, ChangeSupport cs)`

Uses of ChangeSupport in org.biojava.bio.program.das

Methods in org.biojava.bio.program.das that return ChangeSupport
`protected ChangeSupport` | `ReferenceServer.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `DASSequence.getChangeSupport(ChangeType ct)`

Uses of ChangeSupport in org.biojava.bio.search

Methods in org.biojava.bio.search that return ChangeSupport
`protected ChangeSupport` | `SimpleSeqSimilaritySearchSubHit.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `SimpleSeqSimilaritySearchResult.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `SimpleSeqSimilaritySearchHit.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `SequenceDBSearchSubHit.getChangeSupport(ChangeType ct)` Deprecated.
`protected ChangeSupport` | `SequenceDBSearchResult.getChangeSupport(ChangeType ct)` Deprecated.
`protected ChangeSupport` | `SequenceDBSearchHit.getChangeSupport(ChangeType ct)` Deprecated.

Uses of ChangeSupport in org.biojava.bio.seq

Methods in org.biojava.bio.seq that return ChangeSupport
`protected ChangeSupport` | `SimpleAssembly.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `NewSimpleAssembly.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `LazyFeatureHolder.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `FeatureTypes.RepositoryImpl.getChangeSupport(ChangeType ct)`

Uses of ChangeSupport in org.biojava.bio.seq.db

Methods in org.biojava.bio.seq.db that return ChangeSupport
`protected ChangeSupport` | `SequenceDBWrapper.getChangeSupport(ChangeType ct)`

Constructors in org.biojava.bio.seq.db with parameters of type ChangeSupport
`SequenceDBWrapper.SequencesForwarder(Object source, ChangeSupport cs)`

Uses of ChangeSupport in org.biojava.bio.seq.distributed

Methods in org.biojava.bio.seq.distributed that return ChangeSupport
`protected ChangeSupport` | `DistributedSequenceDB.getChangeSupport()`

Uses of ChangeSupport in org.biojava.bio.seq.impl

Methods in org.biojava.bio.seq.impl that return ChangeSupport
`protected ChangeSupport` | `LazyFilterFeatureHolder.getChangeSupport()`
`protected ChangeSupport` | `SimpleSequence.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `SimpleFeature.getChangeSupport(ChangeType ct)`

Uses of ChangeSupport in org.biojava.bio.symbol

Methods in org.biojava.bio.symbol that return ChangeSupport
`protected ChangeSupport` | `SimpleAlphabet.getChangeSupport(ChangeType ct)`
`protected ChangeSupport` | `AbstractSymbol.getChangeSupport(ChangeType changeType)`

Constructors in org.biojava.bio.symbol with parameters of type ChangeSupport
`AbstractSymbolList.EditScreener(Object source, ChangeSupport cs, int min, int max)`
`AbstractSymbolList.EditTranslater(Object source, ChangeSupport cs, int min, int max)`

Uses of ChangeSupport in org.biojava.bio.taxa

Methods in org.biojava.bio.taxa that return ChangeSupport
`protected ChangeSupport` | `AbstractTaxon.getChangeSupport(ChangeType ct)` Deprecated.

Uses of ChangeSupport in org.biojava.ontology

Methods in org.biojava.ontology that return ChangeSupport
`ChangeSupport` | `OntologyTerm.Impl.getChangeSupport(ChangeType ct)`
`ChangeSupport` | `AbstractTerm.getChangeSupport(ChangeType ct)`

Uses of ChangeSupport in org.biojava.utils

Methods in org.biojava.utils that return ChangeSupport
`ChangeSupport` | `ChangeForwarder.changeSupport()` Return the underlying `ChangeSupport` instance that can be used to fire `ChangeEvent`s and mannage listeners.
`protected ChangeSupport` | `AbstractChangeable.generateChangeSupport()` Called the first time a ChangeSupport object is needed.
`protected ChangeSupport` | `AbstractChangeable.getChangeSupport(ChangeType ct)` Called to retrieve the ChangeSupport for this object.

Constructors in org.biojava.utils with parameters of type ChangeSupport
`ChangeForwarder.Retyper(Object source, ChangeSupport changeSupport, ChangeType type)` Create a new Retyper for forwarding events.
`ChangeForwarder(Object source, ChangeSupport changeSupport)` Create a new ChangeForwarder for forwarding events.

Overview | Package | Class | Use | Tree | Deprecated | Index | Help
PREV NEXT | FRAMES NO FRAMES