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## Uses of Class
org.biojava.bio.program.das.dasalignment.Alignment

Packages that use Alignment
org.biojava.bio.program.das.dasalignment | request alignments via DAS

Uses of Alignment in org.biojava.bio.program.das.dasalignment

Methods in org.biojava.bio.program.das.dasalignment that return Alignment
`Alignment` | `DASAlignmentXMLResponseParser.getAlignment(int position)` Returns Alignment at position ...
`Alignment[]` | `DASAlignmentXMLResponseParser.getAlignments()` Returns the alignments.
`Alignment[]` | `DASAlignmentClient.getAlignments()` Returns the alignments.
`Alignment[]` | `DASAlignmentCall.getAlignments()` connect to a DAS alignment service and retreive alignments.
`Alignment[]` | `DASAlignmentClient.getAlignments(String query_)` Returns the alignments.
`Alignment[]` | `DASAlignmentCall.getAlignments(String query)` connect to a DAS alignment service and retreive data.
`Alignment[]` | `DASAlignmentCall.parseDASResponse(InputStream inStream)` parse the Response of a DAS ALignment service and return a biojava Alignment object.

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