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## org.biojava.bio.dp
Class XmlMarkovModel

    java.lang.Object
      org.biojava.bio.dp.XmlMarkovModel

    public class XmlMarkovModel

extends Object

Author:
  Matthew Pocock, Thomas Down, Samiul Hasan

Constructor Summary
`XmlMarkovModel()`

Method Summary
`static WeightMatrix` | `readMatrix(Element root)`
`static MarkovModel` | `readModel(Element root)`
`static void` | `writeMatrix(WeightMatrix matrix, PrintStream out)`
`static void` | `writeModel(MarkovModel model, PrintStream out)`

Methods inherited from class java.lang.Object
`clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait`

Constructor Detail

### XmlMarkovModel

    public XmlMarkovModel()

Method Detail

### readMatrix

    public static WeightMatrix readMatrix(Element root)
                                   throws IllegalSymbolException,
                                          IllegalAlphabetException,
                                          BioException

  Throws:
    `IllegalSymbolException`
    `IllegalAlphabetException`
    `BioException`

### readModel

    public static MarkovModel readModel(Element root)
                                 throws BioException,
                                        IllegalSymbolException,
                                        IllegalAlphabetException

  Throws:
    `BioException`
    `IllegalSymbolException`
    `IllegalAlphabetException`

### writeMatrix

    public static void writeMatrix(WeightMatrix matrix,
                                   PrintStream out)
                            throws Exception

  Throws:
    `Exception`

### writeModel

    public static void writeModel(MarkovModel model,
                                  PrintStream out)
                           throws Exception

  Throws:
    `Exception`

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