Object
Bio::Blast::Report::Hsp
Length of the alignment used
Score (in bits) of HSP
Score density
E-value of HSP
Number of gaps in HSP
Translation frame of subject
Start of HSP in subject
End of HSP
Alignment string for subject (with gaps)
Number of identities in HSP
Formating middle line
Available only for '-m 8' format outputs.
HSP number
Start of PHI-BLAST pattern
End of PHI-BLAST pattern
Number of positives in HSP
Alignment string for the query (with gaps)
Translation frame of query
Start of HSP in query
Sscore of HSP
# File lib/bio/appl/blast/report.rb, line 318 def initialize @hsp = {} end
[Validate]
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