module Bio::Alignment::FactoryTemplate::WrapOutputStdout
mix-in module
Private Instance Methods
_query_local(fn_in, opt, data_stdin = nil)
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Performs alignment by specified filenames
# File lib/bio/alignment.rb, line 2393 def _query_local(fn_in, opt, data_stdin = nil) opt = _generate_options(fn_in, nil, opt) exec_local(opt, data_stdin) @output = @data_stdout @report = self.class::DEFAULT_PARSER.new(@output) @report end