| Function getAlignment Turns a HSP from a Blast search into an Alignment object. getAlignment(hsp,alignment) getAlignment(hsp,alignment,id0,id1) Include Headers seqan/blast.h Parameters
hsp | A Blast HSP. Types: BlastHsp
alignment | An Alignment object to be filled. Types: Align, Alignment Graph
id0 | The Id of the query sequence in the StringSet of the Alignment Graph.
id1 | The Id of the hit sequence in the StringSet of the Alignment Graph.
SeqAn - Sequence Analysis Library - www.seqan.de

Page built @2012/03/14 16:34:46