| Function assignCroppedSeqId Extracts the sequence id up to the first whitespace of a sequence file fragment. assignCroppedSeqId(id, seqFragment, formatTag) Include Headers seqan/file.h Parameters
id | The resulting cropped sequence id of the fragment (e.g. Fasta Id). Note: The resulting id contains no whitespaces. Types: CharString
seqFragment | A sequence file fragment. Types: String
formatTag | A file format tag. Types: AutoSeqFormat, File Format
Remarks After calling split on a ConcatDirect StringSet to divide a file into fragments, this function can be used to extract the sequence id up to the first whitespace of every fragment in the StringSet. See Also split SeqAn - Sequence Analysis Library - www.seqan.de

Page built @2012/03/14 16:34:46